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This comes amid reports of attacks on healthcare workers and assaults on some doctors engaged in COVID-19 duties in different parts of the country.
The home minister interacted with the doctors and the IMA through video-conferencing, a home ministry official said.
Shah appreciated their good work and assured them full security, he said.
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The IMA was planning to stage protests against assaults on some doctors and healthcare workers engaged in COVID-19 duties.
There have been reports of doctors being abused, beaten and denied entry into residences.
Families of at least two doctors, who succumbed to the novel coronavirus in Shillong and Chennai, had faced opposition while performing their last rites as the locals claimed that burying them in their localities may lead to the spread of the infection.